Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0395KEGG: rer:RER_50940 hypothetical protein. (160 aa)    
Predicted Functional Partners:
Tpau_0394
KEGG: nfa:nfa8260 hypothetical protein; PFAM: AAA ATPase central domain protein; Tetratricopeptide TPR_4; SMART: AAA ATPase.
       0.640
Tpau_0396
KEGG: nfa:nfa46550 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.568
Tpau_0397
PFAM: protein of unknown function DUF214; KEGG: rop:ROP_61080 hypothetical membrane protein.
       0.568
Tpau_0398
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmi:MMAR_4486 dehydrogenase.
       0.433
Tpau_0399
KEGG: mva:Mvan_4806 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein.
       0.433
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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