Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0410PFAM: condensation domain protein; KEGG: nfa:nfa30230 hypothetical protein. (474 aa)    
Predicted Functional Partners:
Tpau_3476
KEGG: stp:Strop_2778 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding.
  
 
 0.717
Tpau_3985
PFAM: MbtH domain protein; KEGG: mjl:Mjls_3474 MbtH domain-containing protein.
  
 
 0.717
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
  
     0.710
Tpau_0518
Hypothetical protein; KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
 
    0.683
Tpau_0881
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
     0.681
Tpau_0312
Hypothetical protein; KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
 
    0.679
Tpau_0416
KEGG: rer:RER_11110 hypothetical protein.
  
     0.671
Tpau_2927
KEGG: rha:RHA1_ro06456 hypothetical protein.
  
     0.671
Tpau_1406
KEGG: mab:MAB_0672c hypothetical protein.
  
   
 0.663
Tpau_3922
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
     0.663
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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