Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0432KEGG: mab:MAB_4762 hypothetical protein; TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; PFAM: ABC-2 type transporter. (666 aa)    
Predicted Functional Partners:
Tpau_0433
KEGG: mpa:MAP2368c hypothetical protein.
 
    0.958
Tpau_0431
PFAM: acyltransferase 3; KEGG: mmi:MMAR_4188 integral membrane acyltransferase.
       0.775
Tpau_3987
TIGRFAM: amino acid adenylation domain protein; daunorubicin resistance ABC transporter ATPase subunit; PFAM: AMP-dependent synthetase and ligase; Thioesterase; ABC transporter related; phosphopantetheine- binding; condensation domain protein; KEGG: rer:RER_30610 non-ribosomal peptide synthetase; SMART: AAA ATPase.
  
 
 0.574
Tpau_2412
KEGG: mmi:MMAR_2582 hypothetical protein.
  
     0.489
Tpau_0107
KEGG: rop:ROP_35350 glutamate synthase large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II.
  
    0.479
Tpau_0434
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54510 putative acyl-CoA dehydrogenase.
       0.468
Tpau_3476
KEGG: stp:Strop_2778 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding.
  
 
 0.456
Tpau_2154
FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; KEGG: nfa:nfa8640 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; ABC-2 type transporter; Forkhead-associated protein; SMART: AAA ATPase; Forkhead-associated protein.
  
  
 0.442
Tpau_3058
PFAM: Abortive infection protein; KEGG: mab:MAB_0497 hypothetical protein.
 
  
 0.442
Tpau_1356
KEGG: sco:SCO2723 ABC transporter ATP-binding protein; PFAM: ABC transporter related; X-Pro dipeptidyl- peptidase domain protein; peptidase S15; SMART: AAA ATPase.
  
  
 0.430
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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