Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0434PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54510 putative acyl-CoA dehydrogenase. (610 aa)    
Predicted Functional Partners:
Tpau_4183
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
 
 0.746
Tpau_0342
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
 
 0.745
Tpau_0628
PFAM: Protein of unknown function DUF2596; KEGG: rha:RHA1_ro02072 hypothetical protein.
  
     0.729
Tpau_3363
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rop:ROP_50970 putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.729
Tpau_2916
PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; KEGG: rha:RHA1_ro06463 electron transfer flavoprotein alpha-subunit.
 
 
 0.685
Tpau_0428
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: nfa:nfa54600 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.629
Tpau_2917
PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: nfa:nfa42790 putative electron transfer flavoprotein beta subunit.
 
 
 0.625
Tpau_3936
PFAM: Anion-transporting ATPase; KEGG: rer:RER_04660 anion-transporting ATPase.
  
     0.624
Tpau_1304
PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_40980 long-chain fatty-acid--CoA ligase.
  
 0.596
Tpau_2680
PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro01121 long-chain-fatty-acid--CoA ligase.
  
 0.596
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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