Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0435PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: rha:RHA1_ro05204 3-demethylubiquinone-9 3- methyltransferase. (243 aa)    
Predicted Functional Partners:
Tpau_3666
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: rer:RER_45520 oxidoreductase.
      0.836
Tpau_0436
KEGG: rop:ROP_15710 putative endonuclease IV; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2.
       0.778
Tpau_0437
PFAM: protein of unknown function DUF1023; KEGG: mjl:Mjls_0770 hypothetical protein.
 
     0.585
Tpau_0819
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: msm:MSMEG_5701 molybdopterin converting factor, subunit 2.
   
  
 0.556
Tpau_0483
PFAM: metallophosphoesterase; KEGG: rop:ROP_04920 serine/threonine protein phosphatase PrpA.
   
   0.530
Tpau_0434
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54510 putative acyl-CoA dehydrogenase.
       0.510
Tpau_0310
PFAM: monooxygenase FAD-binding; KEGG: sco:SCO3245 salicylate hydroxylase (secreted protein).
   
 0.406
Tpau_0392
PFAM: monooxygenase FAD-binding; KEGG: kra:Krad_0778 monooxygenase FAD-binding.
   
 0.406
Tpau_1606
PFAM: monooxygenase FAD-binding; KEGG: mab:MAB_1646c hypothetical protein.
   
 0.406
Tpau_2424
PFAM: monooxygenase FAD-binding; KEGG: sen:SACE_6186 monooxygenase, FAD-binding.
   
 0.406
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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