Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0476PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_4120 hydrolase, alpha/beta fold family protein, putative. (298 aa)    
Predicted Functional Partners:
Tpau_0478
PFAM: Uncharacterised conserved protein UCP07580; KEGG: mjl:Mjls_2904 hypothetical protein.
 
     0.902
Tpau_2974
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_57060 putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
      0.890
Tpau_3606
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro05664 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
      0.871
Tpau_2257
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_60670 putative alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.841
Tpau_0477
PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: msm:MSMEG_3676 phenoxybenzoate dioxygenase beta subunit.
  
  
 0.820
Tpau_1209
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_41250 alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.818
Tpau_0475
PFAM: alpha/beta hydrolase fold; KEGG: cmi:CMM_2872 putative hydrolase/acyltransferase.
 
     0.814
Tpau_3515
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nfa:nfa28640 putative short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.747
Tpau_1093
PFAM: Uncharacterised conserved protein UCP07580; KEGG: mjl:Mjls_2904 hypothetical protein.
 
     0.579
Tpau_3926
PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa3520 putative hydrolase.
  
     0.561
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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