Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0502KEGG: rha:RHA1_ro05516 hypothetical protein. (230 aa)    
Predicted Functional Partners:
Tpau_0492
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; globin; KEGG: mkm:Mkms_0481 oxidoreductase FAD-binding subunit; Belongs to the globin family.
 
  
 0.898
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.853
carB
KEGG: rha:RHA1_ro07152 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl- phosphate synthetase large chain domain protein; Belongs to the CarB family.
  
 
 0.851
Tpau_2580
TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: rer:RER_30050 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
  
 0.847
pyrB
TIGRFAM: aspartate carbamoyltransferase; KEGG: mjl:Mjls_2404 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
  
 0.842
Tpau_0504
PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rop:ROP_56060 putative RNA methyltransferase.
  
    0.840
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.836
Tpau_0505
Alpha-1,6-mannanase; KEGG: rha:RHA1_ro05531 alpha-1,6-mannanase.
 
     0.796
Tpau_1794
KEGG: rha:RHA1_ro06772 hypothetical protein.
  
     0.773
Tpau_3062
PFAM: protein of unknown function UPF0089; KEGG: mab:MAB_1278 hypothetical protein.
 
 
 
 0.773
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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