Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0518Hypothetical protein; KEGG: bch:Bcen2424_6766 PE-PGRS family protein. (550 aa)    
Predicted Functional Partners:
Tpau_2062
Hypothetical protein; KEGG: similar to CG16995 CG16995-PA.
 
   
 0.781
Tpau_0400
PFAM: MgtE intracellular region; KEGG: similar to gag protein.
 
     0.777
Tpau_0519
PFAM: Lipoprotein LpqT, predicted; KEGG: mjl:Mjls_5766 hypothetical protein.
       0.776
Tpau_1333
Hypothetical protein; KEGG: rha:RHA1_ro05481 protease.
 
    0.775
Tpau_3922
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
 
     0.775
Tpau_0881
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
     0.774
Tpau_3329
KEGG: prw:PsycPRwf_1946 hypothetical protein.
  
     0.774
Tpau_1299
KEGG: bld:BLi00801 hypothetical protein.
  
     0.773
Tpau_0332
Secretion protein snm4; KEGG: msm:MSMEG_0068 transmembrane protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
  
     0.771
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
  
     0.770
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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