Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0575KEGG: mxa:MXAN_4531 hypothetical protein. (262 aa)    
Predicted Functional Partners:
Tpau_0576
PFAM: flavin reductase domain protein FMN-binding; KEGG: mul:MUL_4138 oxidase.
       0.566
Tpau_0574
Hypothetical protein.
       0.556
Tpau_1725
PFAM: metallophosphoesterase; KEGG: rha:RHA1_ro06649 metallophosphoesterase.
  
     0.453
Tpau_0755
KEGG: rop:ROP_03570 hypothetical membrane protein.
  
     0.420
Tpau_0577
Hypothetical protein; KEGG: xca:xccb100_2218 flagellar hook-length control protein FliK.
       0.400
Tpau_0578
Hypothetical protein.
       0.400
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.