Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0583PFAM: flavin-containing monooxygenase FMO; KEGG: cyc:PCC7424_4856 flavin-containing monooxygenase. (449 aa)    
Predicted Functional Partners:
Tpau_0582
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: abb:ABBFA_001631 short chain dehydrogenase family protein.
      0.823
Tpau_0584
PFAM: regulatory protein TetR; KEGG: msm:MSMEG_2368 transcriptional regulator.
 
     0.575
Tpau_2227
PFAM: cytochrome P450; KEGG: rer:pREC1_0055 cytochrome P450.
 
 
 0.454
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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