Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0628PFAM: Protein of unknown function DUF2596; KEGG: rha:RHA1_ro02072 hypothetical protein. (170 aa)    
Predicted Functional Partners:
mshA
UDP-N-acetylglucosamine; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
       0.833
Tpau_0626
PFAM: alpha/beta hydrolase fold; KEGG: rop:ROP_17460 putative non-heme haloperoxidase.
       0.770
Tpau_3936
PFAM: Anion-transporting ATPase; KEGG: rer:RER_04660 anion-transporting ATPase.
  
     0.747
Tpau_3911
KEGG: rer:RER_05010 hypothetical protein.
  
     0.746
Tpau_0434
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa54510 putative acyl-CoA dehydrogenase.
  
     0.729
Tpau_2678
PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; KEGG: rop:ROP_08470 hypothetical protein.
  
     0.722
Tpau_0625
Hypothetical protein.
       0.707
Tpau_3659
KEGG: rop:ROP_18240 putative Xre family DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
  
     0.693
Tpau_1108
TIGRFAM: anti-sigma factor; KEGG: nfa:nfa45830 putative anti-sigma factor.
  
     0.690
Tpau_3937
PFAM: Anion-transporting ATPase; KEGG: mgi:Mflv_1367 anion-transporting ATPase.
  
     0.668
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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