Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0635PFAM: aldo/keto reductase; KEGG: avi:Avi_0153 aldo-keto reductase. (328 aa)    
Predicted Functional Partners:
Tpau_0636
KEGG: mjl:Mjls_2649 MerR family transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
     0.883
Tpau_0861
PFAM: aldo/keto reductase; KEGG: mab:MAB_1528c oxidoreductase.
 
 
0.619
Tpau_0637
PFAM: protein of unknown function DUF664; KEGG: mab:MAB_4436c hypothetical protein.
     
 0.617
Tpau_1832
Histone deacetylase; KEGG: rer:RER_28020 acetoin utilization protein; PFAM: histone deacetylase superfamily.
   
  0.595
Tpau_0373
PFAM: major intrinsic protein; KEGG: ach:Achl_1986 major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.499
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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