Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0650KEGG: rha:RHA1_ro04522 TetR family transcriptional regulator. (202 aa)    
Predicted Functional Partners:
gpmA
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.773
Tpau_0649
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
     0.678
Tpau_0929
PFAM: regulatory protein TetR; KEGG: rop:ROP_35340 putative TetR family transcriptional regulator.
  
     0.658
Tpau_3618
KEGG: rer:RER_17430 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
  
    0.606
Tpau_0652
KEGG: cms:CMS_0423 hypothetical protein.
 
     0.585
Tpau_2691
KEGG: nfa:nfa17250 hypothetical protein.
  
     0.562
Tpau_0845
KEGG: rha:RHA1_ro04983 hypothetical protein.
  
     0.553
Tpau_0943
KEGG: rop:ROP_62460 hypothetical protein.
  
     0.511
Tpau_1466
KEGG: mab:MAB_2776 hypothetical protein.
   
    0.505
Tpau_3972
PFAM: beta-lactamase; KEGG: rop:ROP_02950 hypothetical protein.
  
     0.496
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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