Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0661TIGRFAM: DNA binding domain protein, excisionase family; KEGG: rop:ROP_17310 hypothetical protein. (80 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.635
Tpau_0659
KEGG: rop:ROP_17330 hypothetical protein.
       0.626
Tpau_0658
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rha:RHA1_ro02063 hypothetical protein.
  
    0.609
Tpau_0657
KEGG: rer:RER_16250 hypothetical protein.
       0.566
Tpau_0662
PFAM: Protein of unknown function DUF1713; KEGG: sen:SACE_6957 hypothetical protein.
       0.563
Tpau_0437
PFAM: protein of unknown function DUF1023; KEGG: mjl:Mjls_0770 hypothetical protein.
  
     0.554
Tpau_0664
KEGG: rer:RER_16370 hypothetical protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
       0.511
Tpau_2801
PFAM: DNA polymerase III delta; KEGG: nfa:nfa13940 hypothetical protein.
  
     0.484
Tpau_0656
PFAM: Ppx/GppA phosphatase; KEGG: mab:MAB_4013c hypothetical protein.
       0.474
Tpau_0655
KEGG: rop:ROP_17380 hypothetical protein.
 
     0.471
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.