Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0679PFAM: amino acid permease-associated region; KEGG: msm:MSMEG_1625 amino acid transporter, putative. (517 aa)    
Predicted Functional Partners:
Tpau_0682
Putrescine oxidase; KEGG: mlu:Mlut_10320 monoamine oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase; HI0933 family protein.
 
 
 
 0.919
Tpau_0681
KEGG: ach:Achl_0059 agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; Belongs to the agmatine deiminase family.
 
   
 0.810
Tpau_0680
PFAM: Amidase; KEGG: mkm:Mkms_5239 amidase.
   
   0.789
Tpau_1225
PFAM: UspA domain protein; KEGG: mkm:Mkms_1198 UspA domain-containing protein.
 
  
 0.734
Tpau_0683
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: mlu:Mlut_10310 transcriptional regulator, TetR family.
 
     0.714
Tpau_0678
PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_3588 putative acyl-CoA oxidase.
   
   0.641
Tpau_1307
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: rop:ROP_56700 putative CdaR family transcriptional regulator.
 
     0.620
Tpau_1417
Agmatinase; KEGG: rer:RER_05760 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
 
 
 0.436
glgE
Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.425
Tpau_1390
Alpha amylase catalytic region; KEGG: rha:RHA1_ro01389 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
   
 0.425
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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