Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0692Cytochrome c-type biogenesis protein CcsB; KEGG: rha:RHA1_ro02032 cytochrome c assembly membrane protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein. (330 aa)    
Predicted Functional Partners:
Tpau_0691
PFAM: ResB family protein; KEGG: rer:RER_16700 cytochrome c biogenesis protein ResB.
 
  
 0.994
Tpau_0690
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rer:RER_16690 cytochrome c biogenesis protein CcdA.
 
  
 0.989
Tpau_0689
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mgi:Mflv_0052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
  
 0.971
Tpau_0669
PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: nfa:nfa51680 putative uroporphyrin-III C- methyltransferase/uroporphyrinogen-III synthase.
 
  
 0.894
Tpau_0688
PFAM: Phosphoglycerate mutase; KEGG: rer:RER_16670 hypothetical protein.
  
    0.846
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; KEGG: nfa:nfa51600 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III.
 
  
 0.818
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.650
Tpau_1703
uroporphyrin-III C-methyltransferase; KEGG: nfa:nfa40770 putative uroporphyrinogen III methylase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
  
 0.614
Tpau_2695
PFAM: Cytochrome b/b6 domain; KEGG: rer:RER_35980 menaquinol-cytochrome c reductase cytochrome b subunit.
  
  
 0.576
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.536
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.