Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0698PFAM: GCN5-related N-acetyltransferase; KEGG: sen:SACE_5162 acetyltransferase. (158 aa)    
Predicted Functional Partners:
Tpau_0699
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO0235 short chain dehydrogenase.
       0.757
Tpau_0700
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: sco:SCO0233 DNA-binding protein.
       0.522
Tpau_4198
PFAM: Luciferase-like, subgroup; KEGG: saq:Sare_0082 luciferase family protein.
  
     0.425
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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