STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0739PFAM: MaoC domain protein dehydratase; KEGG: rop:ROP_16600 beta-hydroxyacyl-[acyl-carrier- protein] dehydratase subunit HadB. (141 aa)    
Predicted Functional Partners:
Tpau_0738
PFAM: MaoC domain protein dehydratase; KEGG: nfa:nfa51180 hypothetical protein.
 
 0.999
Tpau_4084
KEGG: nfa:nfa51180 hypothetical protein.
 
 0.997
rpmG
KEGG: mbt:JTY_0653 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
     
 0.705
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
   
    0.692
Tpau_1386
KEGG: rop:ROP_11060 hypothetical protein.
  
   
 0.666
Tpau_2724
PFAM: Acyl transferase; KEGG: nfa:nfa16150 acyl-carrier-protein S- malonyltransferase.
  
   
 0.662
Tpau_2723
Putative transcriptional regulator, PucR family; KEGG: rha:RHA1_ro01198 hypothetical protein.
  
     0.650
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
 
     0.602
Tpau_2082
Enoyl-(acyl-carrier-protein) reductase (NADH); KEGG: nfa:nfa34760 enoyl-(acyl carrier protein) reductase.
 
  
 0.600
Tpau_0449
Catalase; KEGG: sgr:SGR_1958 putative catalase; PFAM: Catalase related subgroup; Catalase domain protein; Belongs to the catalase family.
   
 0.587
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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