Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0752KEGG: nfa:nfa51100 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (397 aa)    
Predicted Functional Partners:
Tpau_2250
PFAM: protein of unknown function DUF140; KEGG: rop:ROP_16510 putative YrbE family protein.
 
  
  0.955
Tpau_1246
PFAM: protein of unknown function DUF140; KEGG: nfa:nfa11130 putative YrbE family protein.
 
  
  0.954
Tpau_3789
PFAM: protein of unknown function DUF140; KEGG: rop:ROP_18130 putative YrbE family protein.
 
  
  0.954
Tpau_4170
PFAM: protein of unknown function DUF140; KEGG: nfa:nfa11130 putative YrbE family protein.
 
  
  0.954
Tpau_1245
PFAM: protein of unknown function DUF140; KEGG: nfa:nfa11140 putative YrbE family protein.
 
  
  0.953
Tpau_2249
PFAM: protein of unknown function DUF140; KEGG: rha:RHA1_ro01972 hypothetical protein.
 
  
  0.953
Tpau_3790
PFAM: protein of unknown function DUF140; KEGG: rop:ROP_18120 putative YrbE family protein.
 
  
  0.953
Tpau_4171
PFAM: protein of unknown function DUF140; KEGG: nfa:nfa11140 putative YrbE family protein.
 
  
  0.953
Tpau_2246
KEGG: rha:RHA1_ro01969 Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
     0.828
Tpau_2245
KEGG: rop:ROP_16460 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
     0.808
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.