Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0785PFAM: GCN5-related N-acetyltransferase; KEGG: mva:Mvan_2492 GCN5-related N- acetyltransferase. (176 aa)    
Predicted Functional Partners:
trmD
tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
      0.789
Tpau_0784
PFAM: beta-lactamase domain protein; KEGG: sen:SACE_2751 hypothetical protein.
       0.773
Tpau_0782
KEGG: mul:MUL_2416 hypothetical protein.
       0.570
Tpau_0783
KEGG: nfa:nfa55940 hypothetical protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
       0.570
Tpau_0781
PFAM: Phosphoglycerate mutase; KEGG: met:M446_6214 putative phosphohistidine phosphatase, SixA.
       0.427
Tpau_0780
Putative phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; KEGG: rop:ROP_16360 hypothetical protein.
       0.424
Tpau_0779
Glycerone kinase; KEGG: mab:MAB_0194 dihydroxyacetone kinase family protein; PFAM: Dak kinase; Dak phosphatase.
       0.421
Tpau_1212
KEGG: nfa:nfa46910 hypothetical protein.
  
     0.414
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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