Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_0864Secretion protein snm4; KEGG: nfa:nfa8270 hypothetical protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571. (497 aa)    
Predicted Functional Partners:
Tpau_3367
PFAM: protein of unknown function DUF690; KEGG: nfa:nfa8250 hypothetical protein.
  
 
 
 0.989
Tpau_0865
Cell division FtsK/SpoIIIE; KEGG: nfa:nfa8290 putative FtsK/SpoIIIE family protein; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
 
 
 
 0.986
Tpau_0333
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: msm:MSMEG_0083 membrane-anchored mycosin mycp1.
 
 
 0.970
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
 
 
 0.963
Tpau_0863
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: nfa:nfa8280 putative protease; Belongs to the peptidase S8 family.
 
 
 0.935
Tpau_0904
KEGG: rer:RER_19310 hypothetical protein.
  
 
 
 0.808
Tpau_3374
KEGG: nfa:nfa8180 hypothetical protein.
  
     0.761
Tpau_3378
KEGG: nfa:nfa8520 hypothetical protein.
 
     0.756
Tpau_1771
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: rha:RHA1_ro06750 DNA translocase FtsK.
    
 
 0.750
Tpau_3546
KEGG: rop:ROP_49410 hypothetical protein.
  
     0.740
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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