Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tpau_0872 | Tpau_0873 | Tpau_0872 | Tpau_0873 | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | KEGG: hypothetical protein. | 0.596 |
Tpau_0872 | Tpau_0874 | Tpau_0872 | Tpau_0874 | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | KEGG: bld:BLi00801 hypothetical protein. | 0.590 |
Tpau_0872 | Tpau_0875 | Tpau_0872 | Tpau_0875 | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | Hypothetical protein. | 0.586 |
Tpau_0872 | glmM | Tpau_0872 | Tpau_0871 | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.701 |
Tpau_0873 | Tpau_0872 | Tpau_0873 | Tpau_0872 | KEGG: hypothetical protein. | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.596 |
Tpau_0873 | Tpau_0874 | Tpau_0873 | Tpau_0874 | KEGG: hypothetical protein. | KEGG: bld:BLi00801 hypothetical protein. | 0.773 |
Tpau_0873 | Tpau_0875 | Tpau_0873 | Tpau_0875 | KEGG: hypothetical protein. | Hypothetical protein. | 0.768 |
Tpau_0873 | glmM | Tpau_0873 | Tpau_0871 | KEGG: hypothetical protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.491 |
Tpau_0874 | Tpau_0872 | Tpau_0874 | Tpau_0872 | KEGG: bld:BLi00801 hypothetical protein. | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.590 |
Tpau_0874 | Tpau_0873 | Tpau_0874 | Tpau_0873 | KEGG: bld:BLi00801 hypothetical protein. | KEGG: hypothetical protein. | 0.773 |
Tpau_0874 | Tpau_0875 | Tpau_0874 | Tpau_0875 | KEGG: bld:BLi00801 hypothetical protein. | Hypothetical protein. | 0.768 |
Tpau_0874 | glmM | Tpau_0874 | Tpau_0871 | KEGG: bld:BLi00801 hypothetical protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.613 |
Tpau_0875 | Tpau_0872 | Tpau_0875 | Tpau_0872 | Hypothetical protein. | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.586 |
Tpau_0875 | Tpau_0873 | Tpau_0875 | Tpau_0873 | Hypothetical protein. | KEGG: hypothetical protein. | 0.768 |
Tpau_0875 | Tpau_0874 | Tpau_0875 | Tpau_0874 | Hypothetical protein. | KEGG: bld:BLi00801 hypothetical protein. | 0.768 |
Tpau_0875 | glmM | Tpau_0875 | Tpau_0871 | Hypothetical protein. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.487 |
glmM | Tpau_0872 | Tpau_0871 | Tpau_0872 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | KEGG: rha:RHA1_ro02529 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. | 0.701 |
glmM | Tpau_0873 | Tpau_0871 | Tpau_0873 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | KEGG: hypothetical protein. | 0.491 |
glmM | Tpau_0874 | Tpau_0871 | Tpau_0874 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | KEGG: bld:BLi00801 hypothetical protein. | 0.613 |
glmM | Tpau_0875 | Tpau_0871 | Tpau_0875 | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | Hypothetical protein. | 0.487 |