node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tpau_0902 | Tpau_0903 | Tpau_0902 | Tpau_0903 | KEGG: mab:MAB_3725c hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: nfa:nfa8920 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.804 |
Tpau_0902 | Tpau_0904 | Tpau_0902 | Tpau_0904 | KEGG: mab:MAB_3725c hypothetical protein. | KEGG: rer:RER_19310 hypothetical protein. | 0.849 |
Tpau_0902 | whiB | Tpau_0902 | Tpau_0901 | KEGG: mab:MAB_3725c hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.447 |
Tpau_0903 | Tpau_0902 | Tpau_0903 | Tpau_0902 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: nfa:nfa8920 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily. | KEGG: mab:MAB_3725c hypothetical protein. | 0.804 |
Tpau_0903 | Tpau_0904 | Tpau_0903 | Tpau_0904 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: nfa:nfa8920 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily. | KEGG: rer:RER_19310 hypothetical protein. | 0.994 |
Tpau_0903 | Tpau_1107 | Tpau_0903 | Tpau_1107 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: nfa:nfa8920 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rop:ROP_64020 RNA polymerase ECF-type sigma factor SigH; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein. | 0.713 |
Tpau_0903 | whiB | Tpau_0903 | Tpau_0901 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: nfa:nfa8920 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.550 |
Tpau_0904 | Tpau_0902 | Tpau_0904 | Tpau_0902 | KEGG: rer:RER_19310 hypothetical protein. | KEGG: mab:MAB_3725c hypothetical protein. | 0.849 |
Tpau_0904 | Tpau_0903 | Tpau_0904 | Tpau_0903 | KEGG: rer:RER_19310 hypothetical protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: nfa:nfa8920 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.994 |
Tpau_0904 | whiB | Tpau_0904 | Tpau_0901 | KEGG: rer:RER_19310 hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.550 |
Tpau_1107 | Tpau_0903 | Tpau_1107 | Tpau_0903 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rop:ROP_64020 RNA polymerase ECF-type sigma factor SigH; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: nfa:nfa8920 RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.713 |
Tpau_1107 | Tpau_1945 | Tpau_1107 | Tpau_1945 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rop:ROP_64020 RNA polymerase ECF-type sigma factor SigH; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein. | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.549 |
Tpau_1107 | whiB | Tpau_1107 | Tpau_0901 | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rop:ROP_64020 RNA polymerase ECF-type sigma factor SigH; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.531 |
Tpau_1633 | Tpau_2336 | Tpau_1633 | Tpau_2336 | PFAM: Protein of unknown function DUF2469; KEGG: rop:ROP_65970 hypothetical protein. | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: mab:MAB_2406 putative HTH-type transcriptional regulator. | 0.741 |
Tpau_1633 | whiB | Tpau_1633 | Tpau_0901 | PFAM: Protein of unknown function DUF2469; KEGG: rop:ROP_65970 hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.641 |
Tpau_1633 | whiB-5 | Tpau_1633 | Tpau_3938 | PFAM: Protein of unknown function DUF2469; KEGG: rop:ROP_65970 hypothetical protein. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.664 |
Tpau_1945 | Tpau_1107 | Tpau_1945 | Tpau_1107 | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | RNA polymerase, sigma-24 subunit, ECF subfamily; KEGG: rop:ROP_64020 RNA polymerase ECF-type sigma factor SigH; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein. | 0.549 |
Tpau_1945 | whiB | Tpau_1945 | Tpau_0901 | (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.516 |
Tpau_2336 | Tpau_1633 | Tpau_2336 | Tpau_1633 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: mab:MAB_2406 putative HTH-type transcriptional regulator. | PFAM: Protein of unknown function DUF2469; KEGG: rop:ROP_65970 hypothetical protein. | 0.741 |
Tpau_2336 | whiA | Tpau_2336 | Tpau_2542 | Transcriptional regulator, MerR family; SMART: regulatory protein MerR; KEGG: mab:MAB_2406 putative HTH-type transcriptional regulator. | Protein of unknown function DUF199; Involved in cell division and chromosome segregation. | 0.745 |