Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Tpau_0925KEGG: art:Arth_0592 proteinase inhibitor I4, serpin; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; Belongs to the serpin family. (421 aa)    
Predicted Functional Partners:
Tpau_1101
KEGG: sco:SCO4985 hypothetical protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap.
   
 0.641
Tpau_0926
PFAM: amidohydrolase 2; KEGG: sma:SAV_4199 hypothetical protein.
       0.617
Tpau_0518
Hypothetical protein; KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
  
     0.596
Tpau_0312
Hypothetical protein; KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
  
     0.591
Tpau_0924
Hypothetical protein; KEGG: snm:SP70585_1816 cell wall surface anchor family protein.
       0.546
Tpau_1299
KEGG: bld:BLi00801 hypothetical protein.
  
     0.524
Tpau_0820
Glycosyltransferase, MGT family; KEGG: sen:SACE_4644 putative glycosyltransferase; TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Belongs to the UDP-glycosyltransferase family.
  
     0.487
Tpau_0400
PFAM: MgtE intracellular region; KEGG: similar to gag protein.
  
     0.473
Tpau_3922
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
     0.465
Tpau_0927
KEGG: sen:SACE_3497 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
       0.461
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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