Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_0950Ribonuclease; KEGG: msm:MSMEG_1658 ribonuclease, putative; TIGRFAM: ribonuclease; PFAM: ribonuclease BN. (332 aa)    
Predicted Functional Partners:
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.763
Tpau_0948
TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: nfa:nfa9310 putative exonuclease; PFAM: Endonuclease/exonuclease/phosphatase.
  
    0.721
Tpau_0945
PFAM: major facilitator superfamily MFS_1; KEGG: mab:MAB_1429 major facilitator superfamily permease.
       0.633
Tpau_0947
KEGG: fre:Franean1_5433 hypothetical protein.
  
    0.633
Tpau_0946
PFAM: guanine-specific ribonuclease N1 and T1; KEGG: rer:RER_20080 guanyl-specific ribonuclease.
       0.623
Tpau_2899
PFAM: amino acid-binding ACT domain protein; KEGG: nfa:nfa42600 hypothetical protein.
 
    0.568
Tpau_0148
KEGG: rop:ROP_39180 hypothetical protein.
  
   
 0.511
Tpau_4049
KEGG: nfa:nfa2370 hypothetical protein.
  
     0.492
Tpau_0876
KEGG: mbt:JTY_3504 hypothetical protein.
  
   
 0.485
Tpau_1115
KEGG: rha:RHA1_ro06355 hypothetical protein.
  
     0.468
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.