Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Tpau_0994KEGG: msm:MSMEG_3688 hypothetical protein. (97 aa)    
Predicted Functional Partners:
Tpau_0993
KEGG: msm:MSMEG_3689 sodium:solute symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.906
Tpau_0996
TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: mbt:JTY_0635 putative galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein.
       0.813
Tpau_0997
Galactokinase; KEGG: mmi:MMAR_0941 galactokinase; TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; Galactokinase galactose-binding domain; Belongs to the GHMP kinase family. GalK subfamily.
       0.813
Tpau_0995
KEGG: aau:AAur_3354 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; PaaX domain protein; SMART: regulatory protein DeoR.
       0.797
Tpau_2269
PFAM: LGFP repeat protein; KEGG: mav:MAV_1082 hypothetical protein.
  
     0.524
Tpau_2248
KEGG: nfa:nfa51070 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
     0.515
Tpau_2247
KEGG: rop:ROP_16480 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
     0.502
Tpau_0199
KEGG: rha:RHA1_ro00326 hypothetical protein.
  
     0.492
Tpau_0998
Beta-galactosidase; KEGG: ere:EUBREC_1385 beta-galactosidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta- sandwich.
       0.486
Tpau_2245
KEGG: rop:ROP_16460 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
     0.480
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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