Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1012PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; KEGG: nfa:nfa42570 hypothetical protein. (147 aa)    
Predicted Functional Partners:
Tpau_4095
KEGG: abo:ABO_2692 hypothetical protein.
  
     0.728
Tpau_2325
PFAM: cytochrome b5; fatty acid desaturase; KEGG: nfa:nfa49300 hypothetical protein.
  
     0.562
Tpau_1011
Drug resistance transporter, EmrB/QacA subfamily; KEGG: rha:RHA1_ro05369 major facilitator superfamily multidrug transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
       0.532
Tpau_2732
KEGG: bph:Bphy_6314 hypothetical protein.
  
     0.514
Tpau_2750
KEGG: rop:ROP_22570 alkane-1-monooxygenase; PFAM: fatty acid desaturase.
  
     0.456
Tpau_1010
PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: spv:SPH_1885 cell wall surface anchor family protein.
       0.445
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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