Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1024PFAM: Integrase catalytic region; KEGG: lxx:Lxx13880 transposase, ISlxx1-degenerated. (430 aa)    
Predicted Functional Partners:
Tpau_1025
KEGG: lxx:Lxx22700 transposase; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
 
 
 0.957
Tpau_0222
PFAM: IstB domain protein ATP-binding protein; KEGG: art:Arth_1779 IstB ATP binding domain- containing protein; Belongs to the DnaA family.
 
 
 0.641
Tpau_1870
PFAM: IstB domain protein ATP-binding protein; KEGG: art:Arth_1779 IstB ATP binding domain- containing protein.
 
 
 0.641
Tpau_3016
PFAM: IstB domain protein ATP-binding protein; KEGG: art:Arth_1779 IstB ATP binding domain- containing protein.
 
 
 0.641
Tpau_3227
PFAM: IstB domain protein ATP-binding protein; KEGG: art:Arth_1779 IstB ATP binding domain- containing protein.
 
 
 0.641
Tpau_1022
KEGG: sen:SACE_4361 hypothetical protein.
       0.568
Tpau_1023
PFAM: protein of unknown function DUF1130; KEGG: mpo:Mpop_4371 protein of unknown function DUF1130.
       0.568
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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