Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1033PFAM: Fe-S metabolism associated SufE; KEGG: msm:MSMEG_1808 Fe-S metabolism associated SufE. (144 aa)    
Predicted Functional Partners:
Tpau_1034
Rhodanese domain protein; KEGG: mab:MAB_3641 putative thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
 
     0.915
Tpau_1032
PFAM: condensation domain protein; KEGG: rer:RER_47370 hypothetical protein.
  
    0.819
Tpau_1035
PFAM: protein of unknown function UPF0089; KEGG: mav:MAV_4881 hypothetical protein.
       0.659
Tpau_1039
KEGG: nfa:nfa14610 acyltransferase PapA5.
       0.655
Tpau_1036
KEGG: nfa:nfa14610 acyltransferase PapA5.
       0.651
Tpau_1037
Sterol 3-beta-glucosyltransferase; KEGG: msm:MSMEG_4740 glycosyltransferase family protein 28; PFAM: glycosyl transferase family 28.
       0.651
Tpau_1038
KEGG: sen:SACE_1411 hypothetical protein.
       0.651
Tpau_1040
Hypothetical protein; KEGG: mab:MAB_3092c acyltransferase PapA5.
  
    0.610
Tpau_2507
TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: rer:RER_30570 iron-sulfur cluster assembly protein SufC; SMART: AAA ATPase.
  
 
 0.594
Tpau_0546
Cysteine desulfurase; KEGG: mab:MAB_0512 aminotransferase/cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase.
  
 
 0.590
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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