Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_1039KEGG: nfa:nfa14610 acyltransferase PapA5. (430 aa)    
Predicted Functional Partners:
Tpau_3476
KEGG: stp:Strop_2778 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding.
  
  
 0.888
Tpau_3693
Amino acid adenylation domain protein; KEGG: rop:ROP_20370 non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein.
  
 
 0.860
Tpau_0175
PFAM: Beta-ketoacyl synthase; Acyl transferase; Thioesterase; phosphopantetheine-binding; KEGG: rha:RHA1_ro04065 polyketide synthase.
  
  
 0.844
Tpau_1035
PFAM: protein of unknown function UPF0089; KEGG: mav:MAV_4881 hypothetical protein.
  
  
 0.795
Tpau_1037
Sterol 3-beta-glucosyltransferase; KEGG: msm:MSMEG_4740 glycosyltransferase family protein 28; PFAM: glycosyl transferase family 28.
  
  
 0.795
Tpau_1036
KEGG: nfa:nfa14610 acyltransferase PapA5.
      
0.787
Tpau_1040
Hypothetical protein; KEGG: mab:MAB_3092c acyltransferase PapA5.
  
 
0.784
Tpau_1038
KEGG: sen:SACE_1411 hypothetical protein.
       0.776
Tpau_3987
TIGRFAM: amino acid adenylation domain protein; daunorubicin resistance ABC transporter ATPase subunit; PFAM: AMP-dependent synthetase and ligase; Thioesterase; ABC transporter related; phosphopantetheine- binding; condensation domain protein; KEGG: rer:RER_30610 non-ribosomal peptide synthetase; SMART: AAA ATPase.
  
 
 0.767
Tpau_1032
PFAM: condensation domain protein; KEGG: rer:RER_47370 hypothetical protein.
  
 
 0.732
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.