Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1054Putative transcriptional regulator, XRE family; KEGG: rha:RHA1_ro08680 hypothetical protein. (125 aa)    
Predicted Functional Partners:
Tpau_1548
KEGG: mab:MAB_1173c hypothetical protein.
  
     0.769
Tpau_4027
KEGG: mab:MAB_1173c hypothetical protein.
  
     0.762
Tpau_1549
KEGG: mab:MAB_1172c hypothetical protein.
 
  
 0.702
Tpau_1373
Thioester reductase domain protein; KEGG: mab:MAB_2962 fatty-acid-CoA ligase FadD; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain; AMP-dependent synthetase and ligase; phosphopantetheine-binding.
  
   
 0.583
Tpau_2172
KEGG: mjl:Mjls_2514 hypothetical protein.
  
     0.565
Tpau_1053
PFAM: beta-lactamase domain protein; KEGG: rer:RER_02100 hypothetical protein.
  
    0.473
Tpau_0730
KEGG: rer:RER_17050 hypothetical protein.
  
     0.453
Tpau_1068
KEGG: mab:MAB_1363 hypothetical protein.
  
    0.452
Tpau_3115
KEGG: mav:MAV_1229 hypothetical protein.
  
     0.444
Tpau_3803
KEGG: mab:MAB_1289c hypothetical protein.
  
     0.420
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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