Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1068KEGG: mab:MAB_1363 hypothetical protein. (129 aa)    
Predicted Functional Partners:
tatB
Twin-arginine translocation protein, TatB subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
 
    0.913
Tpau_1069
PDZ/DHR/GLGF domain protein; KEGG: mab:MAB_1364 serine protease HtrA; PFAM: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein.
 
   
 0.832
Tpau_1171
TIGRFAM: DivIVA domain; KEGG: rer:RER_41650 hypothetical protein.
  
   
 0.774
Tpau_0516
KEGG: nfa:nfa53740 hypothetical protein.
  
     0.771
Tpau_4225
Glycoprotein; KEGG: rha:RHA1_ro03643 glycoprotein.
  
     0.771
Tpau_1115
KEGG: rha:RHA1_ro06355 hypothetical protein.
  
     0.767
Tpau_0977
KEGG: rha:RHA1_ro06252 hypothetical protein.
  
     0.766
Tpau_0730
KEGG: rer:RER_17050 hypothetical protein.
  
     0.762
Tpau_3658
KEGG: rha:RHA1_ro02104 hypothetical protein.
  
     0.762
Tpau_1881
KEGG: rha:RHA1_ro06826 secreted alanine rich protein.
  
     0.761
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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