Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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Score
Tpau_1084Putative diguanylate cyclase; KEGG: rha:RHA1_ro06332 hypothetical protein; TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family. (468 aa)    
Predicted Functional Partners:
Tpau_1104
PFAM: Male sterility domain; KR domain protein; 3- beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro06221 short chain dehydrogenase.
 
 0.948
Tpau_3608
PFAM: Male sterility domain; KR domain protein; 3- beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rop:ROP_62800 putative acyl-CoA reductase.
 
  
 0.938
Tpau_1931
Acyltransferase, WS/DGAT/MGAT; KEGG: rha:RHA1_ro01601 hypothetical protein; TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
  
  
 
0.925
Tpau_0685
Acyltransferase, WS/DGAT/MGAT; KEGG: rha:RHA1_ro06855 hypothetical protein; TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
  
  
 
0.924
Tpau_0179
PFAM: putative esterase; KEGG: rop:ROP_50250 mycolyltransferase.
     
 0.900
Tpau_0180
PFAM: putative esterase; KEGG: rop:ROP_50250 mycolyltransferase.
     
 0.900
Tpau_1085
KEGG: mab:MAB_3550c hypothetical protein.
     
 0.853
Tpau_0663
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: mav:MAV_4649 NAD dependent epimerase/dehydratase family protein.
  
     0.718
Tpau_1083
KEGG: msm:MSMEG_1880 hypothetical protein.
       0.673
Tpau_0664
KEGG: rer:RER_16370 hypothetical protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase.
  
   0.646
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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