Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1154Hypothetical protein; KEGG: YFW1; one of eight Candida genes similar to N. crassa NCU02877.1, and to several plant orfs with glycine-rich C termini; designated YFW for conserved residues. (85 aa)    
Predicted Functional Partners:
Tpau_1152
KEGG: rop:ROP_60090 succinyldiaminopimelate aminotransferase; TIGRFAM: succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II.
       0.741
Tpau_1153
PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: mab:MAB_3022c hypothetical protein.
       0.741
Tpau_1151
4Fe-4S ferredoxin iron-sulfur binding domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.711
Tpau_1155
KEGG: hypothetical protein LOC100029683.
       0.668
Tpau_1156
KEGG: mab:MAB_3021c hypothetical protein.
       0.668
Tpau_1150
PFAM: Na+ dependent nucleoside transporter domain protein; nucleoside recognition domain protein; Na+ dependent nucleoside transporter; KEGG: bpu:BPUM_3586 CNT family concentrative nucleoside transporter.
       0.502
Tpau_1157
Hypothetical protein.
       0.463
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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