Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1182KEGG: mav:MAV_4225 F420-0--gamma-glutamyl ligase; TIGRFAM: F420 biosynthesis protein FbiB, C-terminal domain; F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; nitroreductase. (450 aa)    
Predicted Functional Partners:
Tpau_1183
LPPG domain protein containing protein; KEGG: rop:ROP_63740 LPPG--FO 2-phopspho-L-lactate transferase; TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD.
 
 
 0.999
Tpau_1181
PFAM: NUDIX hydrolase; KEGG: rer:RER_21510 hypothetical protein.
     0.920
Tpau_2843
TIGRFAM: 2-phospho-L-lactate guanylyltransferase CofC; KEGG: nfa:nfa42070 hypothetical protein.
 
   
 0.914
Tpau_1148
TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; 7,8-didemethyl-8-hydroxy-5- deazariboflavin synthase, CofG subunit; PFAM: Radical SAM domain protein; KEGG: rop:ROP_60060 7,8-didemethyl-8-hydroxy-5- deazariboflavine synthase; SMART: Elongator protein 3/MiaB/NifB.
 
   
 0.836
Tpau_2456
KEGG: fal:FRAAL1295 hypothetical protein.
 
   
 0.788
Tpau_2156
KEGG: rha:RHA1_ro04145 hypothetical protein.
 
   
 0.771
Tpau_3812
Putative F420-dependent oxidoreductase; KEGG: saq:Sare_2798 luciferase family protein; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup.
 
  
 0.771
Tpau_1995
KEGG: nfa:nfa34240 putative oxidoreductase; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup.
 
  
 0.764
Tpau_3697
Putative F420-dependent oxidoreductase; KEGG: mgi:Mflv_0268 luciferase family protein; TIGRFAM: probable F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup.
 
  
 0.764
fgd
Glucose-6-phosphate dehydrogenase, F420- dependent; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
 
  
 0.742
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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