Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1199PFAM: extracellular solute-binding protein family 1; KEGG: msm:MSMEG_5061 extracellular solute-binding protein. (483 aa)    
Predicted Functional Partners:
Tpau_1200
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_41460 ABC transporter permease protein.
 
 0.999
Tpau_1201
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rop:ROP_60500 putative ABC transporter permease protein.
 
 0.999
Tpau_1202
KEGG: rer:RER_41440 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.957
Tpau_3526
KEGG: rha:RHA1_ro05117 ABC sugar transporter, ATP- binding component; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.
 
 
 0.801
Tpau_1636
KEGG: rop:ROP_55600 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.799
Tpau_1204
KEGG: rop:ROP_60540 hypothetical protein.
 
     0.775
Tpau_1002
KEGG: rop:ROP_55600 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.771
Tpau_1203
PFAM: metallophosphoesterase; KEGG: rer:RER_41390 hypothetical protein.
 
     0.744
Tpau_3529
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rer:RER_49680 ABC transporter permease protein.
 
 
 0.715
Tpau_1637
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bfa:Bfae_07470 carbohydrate ABC transporter membrane protein.
 
 
 0.679
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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