Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1209PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_41250 alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)    
Predicted Functional Partners:
Tpau_0476
PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_4120 hydrolase, alpha/beta fold family protein, putative.
 
     0.818
Tpau_2230
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: bja:bll4020 short chain dehydrogenase.
  
 
   0.707
Tpau_3699
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fre:Franean1_6415 short-chain dehydrogenase/reductase SDR.
 
   
 0.704
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
  
 
   0.646
Tpau_0389
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase.
  
 
   0.635
Tpau_1210
PFAM: regulatory protein TetR; KEGG: rer:RER_41230 TetR family transcriptional regulator.
 
     0.634
Tpau_3600
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mjl:Mjls_5029 short chain dehydrogenase.
  
 
   0.620
Tpau_1688
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein.
  
 
   0.545
Tpau_1931
Acyltransferase, WS/DGAT/MGAT; KEGG: rha:RHA1_ro01601 hypothetical protein; TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
  
     0.505
Tpau_3513
PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa28620 putative monooxygenase.
 
     0.475
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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