Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1214PFAM: GCN5-related N-acetyltransferase; KEGG: aau:AAur_3257 putative amino-acid acetyltransferase. (207 aa)    
Predicted Functional Partners:
Tpau_1215
SNF2-related protein; KEGG: nfa:nfa10310 putative helicase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
       0.778
Tpau_1216
PFAM: zinc finger SWIM domain protein; KEGG: rha:RHA1_ro01558 hypothetical protein.
       0.778
Tpau_1213
PFAM: thioesterase superfamily protein; KEGG: bpr:GBP346_A1693 thioesterase family protein.
       0.762
Tpau_1179
KEGG: hne:HNE_2946 hypothetical protein.
  
     0.713
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
  
 0.667
Tpau_1212
KEGG: nfa:nfa46910 hypothetical protein.
       0.529
Tpau_1217
PFAM: metallophosphoesterase; KEGG: mjl:Mjls_3950 metallophosphoesterase.
       0.516
Tpau_1218
PFAM: SMC domain protein; KEGG: mav:MAV_1428 hypothetical protein.
       0.515
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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