Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1234KEGG: mjl:Mjls_4697 protein kinase; PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase. (539 aa)    
Predicted Functional Partners:
Tpau_1928
PFAM: Protein phosphatase 2C-like; KEGG: bfa:Bfae_21560 serine/threonine protein phosphatase; SMART: protein phosphatase 2C domain protein.
 
 
 0.846
Tpau_0031
PFAM: Protein phosphatase 2C-like; KEGG: rha:RHA1_ro03700 phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein.
 
 
 0.845
Tpau_0709
Transcriptional regulator, SARP family; KEGG: nfa:nfa53810 putative transcriptional regulator; PFAM: transcriptional activator domain; Forkhead- associated protein; transcriptional regulator domain protein; SMART: Forkhead-associated protein.
 
 
 
 0.710
Tpau_2339
FHA domain containing protein; KEGG: rer:RER_32240 signal transduction protein GarA; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 
 0.660
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
       0.479
Tpau_0032
FHA domain containing protein; KEGG: nfa:nfa850 hypothetical protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
 
 
 0.426
Tpau_2669
KEGG: rha:RHA1_ro01111 protein kinase; PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein.
 
 
0.412
Tpau_0027
KEGG: rer:RER_00280 serine/threonine protein kinase PknB; PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein.
 
 
0.404
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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