STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clpSATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. (109 aa)    
Predicted Functional Partners:
Tpau_0545
PFAM: Ferritin Dps family protein; KEGG: nfa:nfa43820 hypothetical protein; Belongs to the Dps family.
   
 
 0.917
Tpau_1288
PFAM: Domain of unknown function DUF2017; KEGG: mab:MAB_1476 hypothetical protein.
  
  
 0.870
Tpau_1290
PFAM: thiamineS protein; KEGG: mmi:MMAR_4063 putative antigen Cfp10A.
     
 0.796
Tpau_0573
ATPase AAA-2 domain protein; KEGG: nfa:nfa4150 putative Clp protease; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; Belongs to the ClpA/ClpB family.
  
 
 0.790
Tpau_1291
KEGG: rha:RHA1_ro01436 cysteine synthase; TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit.
     
 0.789
Tpau_1289
Mov34/MPN/PAD-1 family protein; KEGG: sen:SACE_1204 Mov34/MPN/PAD-1; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein.
       0.783
Tpau_1292
PFAM: Rhomboid family protein; KEGG: mab:MAB_1481 hypothetical protein.
     
 0.746
Tpau_1286
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
     
 0.716
Tpau_1285
PFAM: isochorismatase hydrolase; KEGG: nfa:nfa10840 putative nicotinamidase.
       0.707
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.642
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.