Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1322PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mmi:MMAR_3956 bacterioferritin comigratory protein Bcp. (157 aa)    
Predicted Functional Partners:
Tpau_1321
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rha:RHA1_ro02754 long-chain-acyl-CoA dehydrogenase.
       0.766
Tpau_1323
KEGG: mjl:Mjls_2449 hypothetical protein.
       0.573
Tpau_1073
ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.561
Tpau_2496
Thioredoxin; KEGG: rop:ROP_07180 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
  
 
 0.546
Tpau_1075
PFAM: thymidylate kinase; KEGG: rop:ROP_63840 thymidylate kinase.
   
   0.539
Tpau_0690
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rer:RER_16690 cytochrome c biogenesis protein CcdA.
 
  
 0.452
Tpau_2460
KEGG: mav:MAV_1003 glutathione S-transferase.
   
  
 0.434
Tpau_4233
Thioredoxin; KEGG: msm:MSMEG_6934 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
  
 
 0.419
Tpau_1268
PFAM: Thioredoxin domain; KEGG: rer:RER_38920 hypothetical protein.
  
 
 0.406
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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