Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1331PFAM: membrane-flanked domain; KEGG: msm:MSMEG_0865 membrane flanked domain- containing protein. (511 aa)    
Predicted Functional Partners:
Tpau_1330
PFAM: membrane-flanked domain; KEGG: mtb:TBMG_02755 hypothetical protein.
 
  
 0.981
Tpau_1329
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: svi:Svir_17470 acyl-CoA dehydrogenase.
       0.559
Tpau_1196
KEGG: rer:RER_41480 hypothetical protein.
 
    0.478
lysS
TIGRFAM: lysyl-tRNA synthetase; KEGG: sma:SAV_4749 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase class 1c; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.457
Tpau_1084
Putative diguanylate cyclase; KEGG: rha:RHA1_ro06332 hypothetical protein; TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; Belongs to the long-chain O-acyltransferase family.
  
    0.437
Tpau_1829
KEGG: mmi:MMAR_2001 hypothetical protein.
  
     0.424
Tpau_0135
PFAM: regulatory protein TetR; KEGG: nfa:nfa33150 putative transcriptional regulator.
  
     0.414
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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