Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1354KEGG: sen:SACE_4775 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR. (254 aa)    
Predicted Functional Partners:
Tpau_1355
KEGG: sma:SAV_5345 ABC transporter integral membrane protein.
       0.774
Tpau_1356
KEGG: sco:SCO2723 ABC transporter ATP-binding protein; PFAM: ABC transporter related; X-Pro dipeptidyl- peptidase domain protein; peptidase S15; SMART: AAA ATPase.
       0.773
Tpau_1357
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sco:SCO6988 oxidoreductase.
       0.492
Tpau_0974
Hypothetical protein; KEGG: pjd:Pjdr2_3229 phytanoyl-CoA dioxygenase.
  
     0.471
Tpau_0636
KEGG: mjl:Mjls_2649 MerR family transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
     0.403
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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