Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1362Myo-inosose-2 dehydratase; KEGG: rha:RHA1_ro01363 sugar phosphate isomerase/epimerase IolE; PFAM: Xylose isomerase domain protein TIM barrel. (294 aa)    
Predicted Functional Partners:
Tpau_1369
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: cmi:CMM_0778 putative acetolactate synthase; Belongs to the TPP enzyme family.
 
 
 0.989
Tpau_1361
Inositol 2-dehydrogenase; KEGG: cgt:cgR_2947 hypothetical protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain.
 
 
 0.982
Tpau_1368
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: cgb:cg0201 hypothetical protein.
 
  
 0.904
Tpau_1365
PFAM: PfkB domain protein; KEGG: cmi:CMM_0774 putative sugar kinase.
  
 0.845
Tpau_1357
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sco:SCO6988 oxidoreductase.
  
 0.799
Tpau_1366
KEGG: cmi:CMM_0775 putative aldolase.
 
    0.793
Tpau_1358
KEGG: rop:ROP_05200 putative ABC transporter substrate-binding protein.
 
    0.681
Tpau_1359
PFAM: inner-membrane translocator; KEGG: rop:ROP_10620 putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.626
Tpau_1360
KEGG: rop:ROP_05220 putative ABC transporter ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.620
Tpau_1364
KEGG: rer:RER_20220 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
  
 0.568
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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