Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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Tpau_1380KEGG: mgi:Mflv_0387 nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein. (849 aa)    
Predicted Functional Partners:
Tpau_1379
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: mva:Mvan_0298 nitrite reductase (NAD(P)H), small subunit.
 
 
 0.999
Tpau_1376
PFAM: major facilitator superfamily MFS_1; KEGG: mjl:Mjls_0254 major facilitator transporter.
 
 
 0.985
Tpau_1510
KEGG: mab:MAB_1933c glutamine synthetase, type I (GlnA1); TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
    
 0.948
Tpau_1381
PFAM: molybdopterin oxidoreductase; flavodoxin/nitric oxide synthase; FAD-binding domain protein; molybdopterin oxidoreductase Fe4S4 region; oxidoreductase FAD/NAD(P)-binding domain protein; molydopterin dinucleotide-binding region; KEGG: ppw:PputW619_1259 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.943
Tpau_1497
KEGG: rop:ROP_08930 glutamine synthetase I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp.
    
 0.933
Tpau_1385
PFAM: NAD-glutamate dehydrogenase; KEGG: nfa:nfa13060 putative NAD-dependent glutamate dehydrogenase.
    
 0.925
Tpau_2888
KEGG: rha:RHA1_ro05312 glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region.
    
 0.915
Tpau_2787
PFAM: 2-nitropropane dioxygenase NPD; KEGG: rha:RHA1_ro01277 2-nitropropane dioxygenase.
     
 0.902
Tpau_1721
Formamidase; KEGG: msm:MSMEG_4367 formamidase; PFAM: Acetamidase/Formamidase.
     
  0.900
Tpau_1703
uroporphyrin-III C-methyltransferase; KEGG: nfa:nfa40770 putative uroporphyrinogen III methylase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
  
 0.835
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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