Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tpau_1451KEGG: cai:Caci_8853 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (258 aa)    
Predicted Functional Partners:
Tpau_1450
PFAM: transport system permease protein; KEGG: tfu:Tfu_0657 ABC-type transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.971
Tpau_1449
PFAM: periplasmic binding protein; KEGG: svi:Svir_28050 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 
 0.962
Tpau_3758
PFAM: transport system permease protein; KEGG: sco:SCO0497 iron-siderophore permease transmembrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.880
Tpau_3774
PFAM: transport system permease protein; inner- membrane translocator; KEGG: sma:SAV_601 ABC transporter iron(III)/siderophore permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.868
Tpau_2321
PFAM: transport system permease protein; KEGG: mab:MAB_0549c putative heme/hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.864
Tpau_3726
PFAM: transport system permease protein; KEGG: ami:Amir_4784 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.864
Tpau_3757
PFAM: transport system permease protein; KEGG: sgr:SGR_6712 iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.852
Tpau_1968
KEGG: mgi:Mflv_0116 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
    
0.732
Tpau_1452
KEGG: mbt:JTY_0353 putative lipoprotein.
       0.608
Tpau_3694
PFAM: periplasmic binding protein; KEGG: rha:RHA1_ro02320 ABC Fe(3+) transporter, substrate binding component.
 
 
 0.581
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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