Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1457PFAM: protein of unknown function DUF1275; KEGG: mab:MAB_3210c hypothetical protein. (247 aa)    
Predicted Functional Partners:
Tpau_2927
KEGG: rha:RHA1_ro06456 hypothetical protein.
  
     0.714
Tpau_0084
KEGG: msm:MSMEG_2697 hypothetical protein.
 
     0.653
Tpau_1248
PFAM: ATP synthase I; KEGG: mmi:MMAR_4094 hypothetical protein.
  
     0.647
Tpau_3062
PFAM: protein of unknown function UPF0089; KEGG: mab:MAB_1278 hypothetical protein.
  
     0.642
Tpau_3546
KEGG: rop:ROP_49410 hypothetical protein.
  
     0.640
Tpau_1373
Thioester reductase domain protein; KEGG: mab:MAB_2962 fatty-acid-CoA ligase FadD; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain; AMP-dependent synthetase and ligase; phosphopantetheine-binding.
  
     0.638
Tpau_1456
PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rer:RER_53420 MFS transporter.
       0.593
Tpau_1459
PFAM: protein of unknown function DUF1304; KEGG: rha:RHA1_ro02814 hypothetical protein.
 
     0.591
Tpau_0746
KEGG: mav:MAV_4996 hypothetical protein.
 
     0.575
Tpau_3658
KEGG: rha:RHA1_ro02104 hypothetical protein.
  
     0.561
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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