Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1490PFAM: cutinase; KEGG: msm:MSMEG_1403 cutinase superfamily protein. (244 aa)    
Predicted Functional Partners:
Tpau_1488
PFAM: acyl-ACP thioesterase; KEGG: mtb:TBMG_01985 hypothetical protein.
 
     0.858
Tpau_1489
PFAM: ribonuclease II; KEGG: rha:RHA1_ro01172 ribonuclease R.
   
 
 0.830
Tpau_3180
KEGG: nfa:nfa26560 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
    
 
 0.823
Tpau_2362
KEGG: rop:ROP_15590 putative protein-tyrosine- phosphatase.
   
 
 0.822
Tpau_0881
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
 
 0.804
Tpau_2870
KEGG: mab:MAB_0652 hypothetical protein.
  
 
 
 0.786
Tpau_0095
Carbonate dehydratase; KEGG: nfa:pnf1540 putative transporter; PFAM: sulphate transporter; carbonic anhydrase; Xanthine/uracil/vitamin C permease.
   
   0.784
Tpau_0333
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: msm:MSMEG_0083 membrane-anchored mycosin mycp1.
  
 
 0.773
Tpau_0332
Secretion protein snm4; KEGG: msm:MSMEG_0068 transmembrane protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
  
   
 0.765
Tpau_3922
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
 
   0.765
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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