Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1538Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. (143 aa)    
Predicted Functional Partners:
Tpau_1537
PFAM: cytochrome c oxidase subunit II; KEGG: nfa:nfa17080 putative cytochrome c oxidase subunit II.
 
 0.999
Tpau_2692
KEGG: mjl:Mjls_3302 cytochrome c oxidase, subunit III; PFAM: cytochrome c oxidase subunit III.
 
 0.999
Tpau_2942
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 0.998
Tpau_2694
Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mab:MAB_1967c ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein).
 
 0.996
Tpau_2695
PFAM: Cytochrome b/b6 domain; KEGG: rer:RER_35980 menaquinol-cytochrome c reductase cytochrome b subunit.
 
 
 0.996
Tpau_2693
PFAM: cytochrome c class I; KEGG: rop:ROP_08590 menaquinol-cytochrome c reductase cytochrome c subunit.
 
 
 
 0.993
Tpau_0816
KEGG: mab:MAB_0863 hypothetical protein.
  
 
   0.954
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
  
 0.954
Tpau_1679
KEGG: nfa:nfa41210 hypothetical protein.
  
 
   0.927
Tpau_1394
KEGG: mtc:MT2544 hypothetical protein.
    
   0.880
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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