Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1542KEGG: bcj:BCAM0069 hypothetical protein. (128 aa)    
Predicted Functional Partners:
Tpau_2698
PFAM: GH3 auxin-responsive promoter; KEGG: bcj:BCAM0069 hypothetical protein.
 
     0.969
Tpau_1543
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: dhd:Dhaf_3417 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
       0.671
Tpau_1544
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sus:Acid_5133 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
       0.671
Tpau_1545
PFAM: aconitate hydratase domain protein; KEGG: syd:Syncc9605_0257 3-isopropylmalate dehydratase, small subunit; Belongs to the LeuD family.
       0.671
Tpau_1546
PFAM: aconitate hydratase domain protein; KEGG: scl:sce0086 isopropylmalate isomerase large subunit.
       0.671
Tpau_2699
KEGG: bcj:BCAM0070 putative hydrolase.
 
     0.585
Tpau_1547
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_2283 putative short-chain dehydrogenase/reductase.
       0.574
Tpau_3476
KEGG: stp:Strop_2778 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding.
     
 0.522
Tpau_0472
PFAM: Squalene/phytoene synthase; KEGG: krh:KRH_20840 phytoene synthase.
 
     0.494
Tpau_3517
PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mab:MAB_3918c putative oxidoreductase.
 
  
 0.475
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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